1、三类医疗器械经营许可证办理方式如下：
（1）申请人提交申请资料到相关部门；
（2）相关部门受理申请人的申请；
（3）到实际场地进行勘察以及对产品进行审核；
（4）准予颁发三类医疗器械许可证。
2、法律依据：《医疗器械监督管理条例》第十四条
第一类医疗器械产品备案和申请第二类、第三类医疗器械产品注册，应当提交下列资料：
（一）产品风险分析资料；
（二）产品技术要求；
（三）产品检验报告；
（四）临床评价资料；
（五）产品说明书以及标签样稿；
关资质全部带上，还需要带上质量人员的相关资料。
5、三类医疗器械经营许可证，需要直接去市级人民政府食品药品监督管理部门办理，在接受资料后的30天内进行审核，如果符合相关规定，就可以颁发三类医疗器械经营许可证。

医疗企业经营许可证一共有三类，其中办理一类医疗器械许可证可以直接办理，经营二类产品是需要办理二类医疗器械经营备案凭证，经营三类产品则需要办理三类医疗器械经营许可证。

首先，经营企业必

 departments accept the application of the applicant; (3) investigate the actual site and review the products; (4) grant the issuance of the Class III medical device license.2. Legal basis: Article 14 of the Regulations on Supervision and Administration of Medical Devices for the filing of Class I medical devices and the application for the registration of Class II and III medical devices, the following data shall be submitted: (1) product risk analysis data; (2) product technical requirements; (3) product inspection report; (4) clinical evaluation data; (5) product instructions and label samples; all qualifications, and relevant data of quality personnel.5. The business license of Class III medical devices needs to be handled directly by the food and drug supervision and administration department of the municipal people's government, and shall be reviewed within 30 days after receiving the materials. If the relevant regulations are met, the business license of Class III medical devices can be issued. There are three types of medical enterprise business licenses, among which the first class medical device license can be directly handled, the operation of second class products needs to apply for the recor